CDS

Accession Number TCMCG051C50469
gbkey CDS
Protein Id XP_024448360.1
Location complement(join(7821..7931,8361..8464,8553..8667,9061..9108,9252..9341,9471..9545,9648..9797,9991..10075,10912..10982,11266..11316,11703..12119,12204..12335,12465..12578,12788..12905,14502..14560,14808..14874,14972..15105,15195..15416,16356..17171))
Gene LOC18107462
GeneID 18107462
Organism Populus trichocarpa

Protein

Length 992aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024592592.1
Definition DNA-directed RNA polymerase 2, chloroplastic/mitochondrial isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K10908        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0000959        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006390        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034245        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGAGAAACGTCGCAAAACAAGCCACTTTGAAATCCCAATCAAAGTCCCTCAATTTCCCTTCATTTCCAAGAACTTACAGCTTTTTAGGAGCCTCTAAAGAACCCATCTTTTTTGAGAAACTGAAGTTCCATTCGCTTAATAACACAAGTCCACGACTGAGTTTTCGAGCAATTGGCGAAATATCAACCCATGAAGATTTTATGGGAAAACCCAGTTTTATTTTTTTGAGAAATAGTGATAGTACTAATGGGAATTGGTGTGCTGGATTTTGTCCAAGAGGGTATGTGAGTGTAGCTGAGGCAGTGTCATCAACAGATGTTGAAGATAATGTGTATGGTGCGGATGAAGTGCAAGAATTGCTGCCAGAAATGAGGAAAGAAGAGGAGAAAGAGGAGCACTTTAGGAGGAGGAGGCTACATGCTAACCCTGGAGTAGGGTCAAGGAAGCATAGGGTCTTAAGGAGAAGGCAAGTGAAGATTGAGGCGGAAGCATGGGAACTGGCAACGAAAGAATATAAGGAGCTTTTGAAGGATATGTGTGAGCATAAGTTGGCTCCTAATTTGCCATATATGAAGAGTTTGTTCCTTGGTTGGTTTGAGCCTTTTAGAGACGCAATTGCGAAAGAGCAGGAGTTGATTAGAACGGGGAAGAGTAGGCAGGGTTATGCTCCGTATTTTGATCTGTTGCCAGCTGACAAGATGTCTGTTATTGCAATGCATCAACTCGCAGCAATGGTAATGACAGGTGGGGAACATGGATGTGCAAGAGTTGTGACTGCTGCTTGTATGATTGGTGATGCAATTGAGCAGGAGATTAGAATACACAATATCTTGGAGAAAACAAGGAAGAAAAAGGAAAAGACTTATGATAGCAAGAATGGTGTAGAAGGTGAATCCCCTGCTGTCATGAAGGAACAAGAAAACCTAAGAAAAAAGGTCACTGATTTGATTAAAAAACAAAAGCTGCCAGCTGTGAGGAAGATTGTGAAGGGGAAGGATGATTCAAAACCATGGAATGCAGATGCTAGGGCTAAGGTTGGAAGCCGTCTAATTGAATTGCTGTTACAAACAGCTTATATACAGCCTCCCTGTGATCAGTTAGCTGATAGTCCATCTGAACCTCGACCTGCATTTGTACATACATTCAGAACTGTGTCATATGAAAATAAGAAGGGCGCGAAAAAATATGGTGTTATTCAATGTGACCCACTAGTCCTCAAAGGCCTAGAGAAAACTGCTAGGCACATGGTGATTCCTTATATGCCAATGTTGGTGCCACCACTTAGATGGAGAGGTTATGATAAAGGAGCTCACTTGTTCTTACCATCCTATGTCATGCGGATACATGGTGCTAAACAGCAACGTGAAGCAGTTAAGAGGGCACCTAGGAAGCAGCTACGACCAGTTTTTGAGGCCCTGGATACGCTAGGGAATACCAGATGGAGGGTAAATAAGAGGGTACTTAGTGTTGTTGATAGAATATGGAGTAATGGAGGCTGTCTTGCTGATTTAGTAGACCACAGTGATGTTCCTTTACCTGAGAAGCCAGAAACAGAAGATGAAGCACTACTTAAGAAGTGGAAGTGGAAACTCAGAGGAGTGAAAAAAGAGAACAAGGAAAGACATGCACAGCGTTGTGACATAGAACTTAAACTTGCTGTAGCACGGAAGATGAAAGATGAAGAGGGTTTCTATTATCCACACAATATTGACTTTCGTGGGCGTGCCTACCCCATGCACCCATACTTAAACCATCTTGGATCAGATCTGTGCCGGGGGATTTTGGAGTTCGCAGAGGGACGCCCTCTTGGAAAGTCAGGCTTACGCTGGCTGAAGATACACATTGCAAATTTATTTGCTGGTGGTGTAGACAAGCTATCTTATGAGGGACGGATAGCTTTTACTGAGAATCACCTTGATGATATATTTGATTCCGCAGACAAACCACTTGACGGAAAGCGTTGGTGGTTGCATGCAGAAGATCCATTTCAGTTCTTGGCTGTGTGCATTAACCTAACTGAAGCTTTGAGAAGCTCCTCGCCAGAAACATATATTTCACATATTCCTGTTCATCAGGATGGTTCCTGCAATGGCCTACAACACTACGCTGCACTTGGAAGAGACAAGTTGGGAGCAGCTGCTGTTAATCTAGTTGCAGGAGAGAAGCCTGCAGATGTCTACTCGGGAATAGCTGCTAGAGTACTTGATATCATGCGGAGGGATGCACAGAAAGATCCAGATGTTTTTCCTGATGCATTGCGTGCAAAAGAATTAATTAACCAGGTGGATAGGAAATTGGTGAAACAGACAGTGATGACATCTGTATATGGTGTAACTTACATTGGTGCTAGAGACCAGATCAAAAGGAGGTTAAAGGAACGTGGTATCACAGAGGAGTCAGATATCTTTGGTTGTTCTTGCTATGCTGCAAAGGTAACCTTAACTGCCTTAGGAGAGATGTTTGAAGCTGCACGAAGTATCATGAACTGGCTTGGGGATTGTGCAAAGATTATCGCATCTGAAAATGAGCCAGTGCGGTGGACAACTCCCCTAGGACTTCCTGTTGTACAACCTTATCGTAAATTAGGGACGCGAAGTATCAAAACTTCCCTACAGGTTTTAATACTACAAAAAGAAACTGACAAGGTTATGGTCCAACGACAGAGAACAGCTTTCCCACCAAATTTTGTTCATTCCCTTGATAGTTCTCATATGATGATGACTGCAGTTGCCTGCAAAGGGGCAGGCTTAAACTTTGCAGGAGTTCACGATTCATATTGGACGCATGCATGTGATGTGGATGAAATGAACAGGATACTGAGGGAAAAGTTTGTTGAACTCTATGAAACACCTATATTGGAGAATTTGTTGGAGAGCTTTGAAAAGTCTTTTCCCACGTTGTCTTTTCCGCCTTTGCCTGACCGGGGAGACTTTGAGCTGAGGGAAGTGTTGGAATCACCTTATTTCTTTAACTGA
Protein:  
MWRNVAKQATLKSQSKSLNFPSFPRTYSFLGASKEPIFFEKLKFHSLNNTSPRLSFRAIGEISTHEDFMGKPSFIFLRNSDSTNGNWCAGFCPRGYVSVAEAVSSTDVEDNVYGADEVQELLPEMRKEEEKEEHFRRRRLHANPGVGSRKHRVLRRRQVKIEAEAWELATKEYKELLKDMCEHKLAPNLPYMKSLFLGWFEPFRDAIAKEQELIRTGKSRQGYAPYFDLLPADKMSVIAMHQLAAMVMTGGEHGCARVVTAACMIGDAIEQEIRIHNILEKTRKKKEKTYDSKNGVEGESPAVMKEQENLRKKVTDLIKKQKLPAVRKIVKGKDDSKPWNADARAKVGSRLIELLLQTAYIQPPCDQLADSPSEPRPAFVHTFRTVSYENKKGAKKYGVIQCDPLVLKGLEKTARHMVIPYMPMLVPPLRWRGYDKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLRPVFEALDTLGNTRWRVNKRVLSVVDRIWSNGGCLADLVDHSDVPLPEKPETEDEALLKKWKWKLRGVKKENKERHAQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHIANLFAGGVDKLSYEGRIAFTENHLDDIFDSADKPLDGKRWWLHAEDPFQFLAVCINLTEALRSSSPETYISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPDVFPDALRAKELINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGITEESDIFGCSCYAAKVTLTALGEMFEAARSIMNWLGDCAKIIASENEPVRWTTPLGLPVVQPYRKLGTRSIKTSLQVLILQKETDKVMVQRQRTAFPPNFVHSLDSSHMMMTAVACKGAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFELREVLESPYFFN